지원사업
학술연구/단체지원/교육 등 연구자 활동을 지속하도록 DBpia가 지원하고 있어요.
커뮤니티
연구자들이 자신의 연구와 전문성을 널리 알리고, 새로운 협력의 기회를 만들 수 있는 네트워킹 공간이에요.
논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 발행연도
- 2019.1
- 수록면
- 599 - 612 (14page)
이용수
초록· 키워드
오류제보하기
Background Sinonovacula constricta is an economically important bivalve species in China, Korea and Japan that widely resides in estuarine and coastal areas where salinity fluctuates rapidly. However, little is known about its adaptation mechanisms to acute salt stresses. Objective To reveal the underlying molecular mechanisms involved in acute salt stresses in juvenile S. constricta. Methods Nine cDNA libraries (triplicate each trial) were established from juvenile S. constricta, which were subjected to low salinity (5 psu), optimal salinity (15 psu) and high salinity (25 psu) for 6 h, respectively. Results Illumina sequencing generated 478,587,310 clean reads totally, which were assembled into 427,057 transcripts of 246,672 unigenes. Compared with the control, 1259 and 2163 differentially expressed genes (DEGs) were identified under acute low and high salt stresses, respectively. GO and KEGG enrichment analyses of DEGs revealed that several key metabolic modulations were mainly responsible for the acute salt stresses. According to the significantly highlighted KEGG pathways, some key DEGs were identified and discussed in details. Notably, based on which, some potential osmolytes were further speculated. Conclusion Here, we carried out a unique report of comparative transcriptome analyses in juvenile S. constricta in response to acute salt stresses. The identified DEGs and their significantly enriched GO terms and KEGG pathways were critical for understanding and further investigating the underlying the physical and biochemical performances, and ultimately facilitated S. constricta breeding. Besides, the transcriptome data greatly enriched the genetic information of S. constricta, which were valuable for promoting its molecular biology researches.
목차
등록된 정보가 없습니다.
참고문헌 (49)
참고문헌 신청
Alcázar R / 2014 / Plant polyamines in stress and development : an emerging area of research in plant sciences / Front Plant Sci 5:319
Anders S / 2010 / Differential expression analysis for sequence count data / Genome Biol 11:R106
Astorga MP / 2014 / Genetic considerations for mollusk production in aquaculture : current state of knowledge / Front Genet 5:435
Carregosa V / 2014 / Tolerance of Venerupis philippinarum to salinity : osmotic and metabolic aspects / Comp Biochem Phys A 171:36~43
FAO / 2018 / FAO Year book. Fishery and Aquaculture Statistics. 2016 / Food and Agriculture Organization of the United Nations :30
Anders S / 2010 / Differential expression analysis for sequence count data / Genome Biol 11:R106
Astorga MP / 2014 / Genetic considerations for mollusk production in aquaculture : current state of knowledge / Front Genet 5:435
Carregosa V / 2014 / Tolerance of Venerupis philippinarum to salinity : osmotic and metabolic aspects / Comp Biochem Phys A 171:36~43
FAO / 2018 / FAO Year book. Fishery and Aquaculture Statistics. 2016 / Food and Agriculture Organization of the United Nations :30
함께 읽어보면 좋을 논문
논문 유사도에 따라 DBpia 가 추천하는 논문입니다. 함께 보면 좋을 연관 논문을 확인해보세요!
-
Phylogenetic Analysis of Sinonovacula constricta Based on Mitochondrial Cytochrome Oxidase I Gene
한국미생물학회 학술대회논문집
2017 .04
-
Genetic Analyses of Sinonovacula constricta from Southern Coast of Korea Based on DNA Sequences of Mitochondrial Cytochrome Oxidase I Gene
한국미생물학회 학술대회논문집
2016 .04
-
Defense responses of sulfur dioxygenase to sulfide stress in the razor clam Sinonovacula constricta
Genes & Genomics
2021 .01
-
Transcriptome analysis reveals salt-stress-regulated biological processes and key pathways in roots of peanut (Arachis hypogaea L.)
Genes & Genomics
2016 .01
-
Transcriptomic analysis provides insight into the mechanism of salinity adjustment in swimming crab Portunus trituberculatus
Genes & Genomics
2019 .01
-
Application of NanoString technologies in angioimmunoblastic T-cell lymphoma
Genes & Genomics
2020 .01
-
The dynamic transcriptome of waxy maize (Zea mays L. sinensis Kulesh) during seed development
Genes & Genomics
2020 .01
-
Cadmium permeates through calcium channels and activates transcriptomic complexity in wheat roots in response to cadmium stress
Genes & Genomics
2017 .01
-
De novo transcriptome sequencing of marine-derived Aspergillus glaucus and comparative analysis of metabolic and developmental variations in response to salt stress
Genes & Genomics
2017 .01
-
Comparative transcriptome profiling of chilling tolerant rice chromosome segment substitution line in response to early chilling stress
Genes & Genomics
2017 .01
-
Transcriptomic analyses reveal novel genes with sexually dimorphic expression in Takifugu rubripes brain during gonadal sex differentiation
Genes & Genomics
2020 .01
-
Phenylalanine ammonia‑lyase family is closely associated with response to phosphate deficiency in rice
Genes & Genomics
2020 .01
-
Comparative transcriptomic profiling of larvae and post-larvae of Macrobrachium rosenbergii in response to metamorphosis and salinity exposure
Genes & Genomics
2016 .01
-
Full-length transcriptome combined with RNA sequence analysis of Fraxinus chinensis
Genes & Genomics
2023 .05
-
Analysis of the potential pathways and target genes in spinal cord injury using bioinformatics methods
Genes & Genomics
2016 .01
-
Genomic insights of Leclercia adecarboxylata strains linked to an outbreak in public hospitals in Mexico
Genes & Genomics
2023 .05
-
De novo assembly, gene annotation, and molecular marker development using Illumina paired-end transcriptome sequencing in the clam Saxidomus purpuratus
Genes & Genomics
2017 .01
-
Transcriptome analysis for identifying possible gene regulations during maize root emergence and formation at the initial growth stage
Genes & Genomics
2018 .01
-
Discovery of genes associated with cadmium accumulation from gill of scallop Chlamys farreri based on high-throughput sequencing
Genes & Genomics
2016 .01
-
Low pH stress responsive transcriptome of seedling roots in wheat (Triticum aestivum L.)
Genes & Genomics
2018 .01
이 논문의 저자 정보
최근 본 자료
댓글(0)
0