지원사업
학술연구/단체지원/교육 등 연구자 활동을 지속하도록 DBpia가 지원하고 있어요.
커뮤니티
연구자들이 자신의 연구와 전문성을 널리 알리고, 새로운 협력의 기회를 만들 수 있는 네트워킹 공간이에요.
논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 저널정보
- 질병관리본부 Osong Public Health and Research Persptectives Osong Public Health and Research Persptectives Vol.8 No.1
- 발행연도
- 2017.1
- 수록면
- 78 - 85 (8page)
이용수
초록· 키워드
오류제보하기
Objectives: An atypical Shigella flexneri strain with a plural agglutination pattern [i.e., reacting not only with serum samples containing type antigen II but also with serum samples containing group antigens (3)4 and 7(8)] was selected for genome sequencing, with the aim of obtaining additional comparative information about such strains. Methods: The genomic DNA of atypical S. flexneri strain NCCP 15744 was sequenced using an Ion Torrent PGM sequencing machine (Life Technologies, USA). The raw sequence data were preprocessed and reference-assembled in the CLC Assembly Cell software (version 4.0.6; CLC bio, USA). Results: Ion Torrent sequencing produced 1,450,025 single reads with an average length of 144 bp, totaling ~209 Mbp. The NCCP 15744 genome is composed of one chromosome and four plasmids and contains a gtrX gene. Among the published genome sequences of S. flexneri strains, including 2457T, Sf301, and 2002017, strain NCCP 15744 showed high similarity with strain 2002017. The differences between NCCP 15744 and 2002017 are as follows: i) NCCP 15744 carries four plasmids whereas 2002017 carries five; ii) 19 genes (including CI, CII, and cro) were lost in the SHI-O genomic island of NCCP 15744 and six genes were gained as compared with strain 2002017. Conclusion: Strain NCCP 15744 is genetically similar to 2002017, but these two strains have different multilocus sequence types and serotypes. The exact reason is unclear, but the 19 lost genes may be responsible for the atypical seroconversion of strain NCCP 15744.
목차
등록된 정보가 없습니다.
참고문헌 (33)
참고문헌 신청
Labrec EH / 1964 / Epithelial cell penetration as an essential step in the pathogenesis of bacillary dysentery / J Bacteriol 88:1503~1518
홍사현 / 2010 / Genetic Characterization of Atypical Shigella flexneri Isolated in Korea / Journal of Microbiology and Biotechnology 20(10):1457~1462
Charles J. Dorman / 1998 / The Shigella virulence gene regulatory cascade: a paradigm of bacterial gene control mechanisms / Molecular Microbiology 29(3):677~684
Myron M. Levine / 2007 / Clinical trials of Shigella vaccines: two steps forward and one step back on a long, hard road / Nature Reviews Microbiology 5(7):540~553
Pryamukhina NS / 1988 / Suggestion to supplement Shigella flexneri classification scheme with the subserovar Shigella flexneri 4c : phenotypic characteristics of strains / J Clin Microbiol 26:1147~1149
홍사현 / 2010 / Genetic Characterization of Atypical Shigella flexneri Isolated in Korea / Journal of Microbiology and Biotechnology 20(10):1457~1462
Charles J. Dorman / 1998 / The Shigella virulence gene regulatory cascade: a paradigm of bacterial gene control mechanisms / Molecular Microbiology 29(3):677~684
Myron M. Levine / 2007 / Clinical trials of Shigella vaccines: two steps forward and one step back on a long, hard road / Nature Reviews Microbiology 5(7):540~553
Pryamukhina NS / 1988 / Suggestion to supplement Shigella flexneri classification scheme with the subserovar Shigella flexneri 4c : phenotypic characteristics of strains / J Clin Microbiol 26:1147~1149
함께 읽어보면 좋을 논문
논문 유사도에 따라 DBpia 가 추천하는 논문입니다. 함께 보면 좋을 연관 논문을 확인해보세요!
-
Resource Development and Investigation of Novel Species from Unidentified Pathogens in NCCP using MALDI-TOF MS and 16S rRNA Gene Analysis
JOURNAL OF BACTERIOLOGY AND VIROLOGY
2016 .12
-
Determinants of depression in non-cardiac chest pain patients: a cross sectional study
The Korean Journal of Pain
2021 .10
-
Enteropathy-associated T-cell lymphoma type II; Gastrointestinal lymphoma; Endoscopy; Double-balloon enteroscopy
Gut and Liver
2016 .01
-
The Role of Psychological Factors in Noncardiac Chest Pain of Esophageal Origin
Journal of Neurogastroenterology and Motility (JNM)
2024 .07
-
국내 한 육아 기관을 다니는 소아에서 확인된Extended-Spectrum β-Lactamase 생성Shigella flexneri 감염
Pediatric Infection and Vaccine
2016 .01
-
STRAIN Echocardiography : How to assess Strain on Echo
대한초음파의료영상학회 학술대회 초록집
2021 .05
-
Characterization of hydrocarbon degrading microorganisms from Glycine max and Zea mays phytoremediated crude oil contaminated soil
Environmental Analysis Health and Toxicology
2022 .06
-
Low Serum Pancreatic Amylase and Lipase Values Are Simple and Useful Predictors to Diagnose Chronic Pancreatitis
Gut and Liver
2017 .01
-
Strain and Strain Rate Echocardiography in Rat Myocardial Ischemia Reperfusion Injury Model
한국실험동물학회 학술발표대회 논문집
2017 .08
-
Sequence analysis of the spike gene of isolated from South China during 2011-2015
Journal of Veterinary Science
2017 .06
-
Characterization of Extended-Spectrum β-Lactamase Genes of Shigella flexneri Isolates With Fosfomycin Resistance From Patients in China
Annals of Laboratory Medicine
2017 .01
-
Current Awareness and Use of the Strain Echocardiography in Routine Clinical Practices: Result of a Nationwide Survey in Korea
Journal of Cardiovascular Imaging
2017 .01
-
Strain echocardiography
대한초음파의료영상학회 학술대회 초록집
2021 .05
-
Near-complete genome sequence of a reassortant H1N2 swine influenza virus isolated from a pig in the Republic of Korea in 2016
예방수의학회지
2021 .01
-
Genome Sequencing of Human Cytomegalovirus Strain LCW and Identification of Asia-specific Cluster
JOURNAL OF BACTERIOLOGY AND VIROLOGY
2018 .12
-
Identification of Non-Aggregatibacter actinomycetemcomitans Bacteria Grown on the Tryptic soy-Serum-Bacitracin-Vancomycin Medium
International Journal of Oral Biology
2016 .12
-
Comparative Genomic Analysis of Staphylococcal Cassette Chromosome mec Type V Staphylococcus aureus Strains and Estimation of the Emergence of SCCmec V Clinical Isolates in Korea
Annals of Laboratory Medicine
2024 .01
-
Reverse vaccinology approach for the identification and characterization of outer membrane proteins of Shigella flexneri as potential cellular- and antibody-dependent vaccine candidates
Clinical and Experimental Vaccine Research
2020 .01
-
Effect of maternal job strain during pregnancy on infant neurodevelopment by gender at 6 and 12 months : Mothers and Children’s Environmental Health (MOCEH) study
대한직업환경의학회지
2015 .03
-
Genetic Characterization of Clostridium botulinum Isolated from the First Case of Infant Botulism in Korea
Annals of Laboratory Medicine
2021 .09
이 논문의 저자 정보
최근 본 자료
댓글(0)
0