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논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 발행연도
- 2017.1
- 수록면
- 611 - 621 (11page)
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초록· 키워드
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As the largest class of resistant genes, the nucleotide binding site (NBS) has been studied extensively at a genome-wide level in rice, sorghum, maize, barley and hexaploid wheat. However, no such comprehensive analysis has been conducted of the NBS gene family in Triticum urartu, the donor of the A genome to the common wheat. Using a bioinformatics method, 463 NBS genes were isolated from the whole genome of T. urartu, of which 461 had location information. The expansion pattern and evolution of the 461 NBS candidate proteins were analyzed, and 118 of them were duplicated. By calculating the lengths of the copies, it was inferred that the NBS resistance gene family of T. urartu has experienced at least two duplication events. Expression analysis based on RNA-seq data found that 6 genes were differentially expressed among Tu38, Tu138 and Tu158 in response to Blumeria graminis f.sp.tritici (Bgt). Following Bgt infection, the expression levels of these genes were up-regulated. These results provide critical references for further identification and analysis of NBS family genes with important functions.
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참고문헌 (47)
참고문헌 신청
Akhunov ED / 2013 / Comparative analysis of syntenic genes in grass genomesreveals accelerated rates of gene structure and coding sequence evolutionin polyploid wheat / Plant Physiol 161:252~265
Arya P / 2014 / Genome-wide identification and expression analysis of NBS-encoding genes in Malus x domestica and expansion of NBS genes family in Rosaceae / PLoS ONE 9:e107987
Aswati Nair R / 2007 / Isolation, characterization and expression studies of resistance gene candidates (RGCs) from Zingiber spp / Theor Appl Genet 116:123~134
Azhar M / 2008 / Genomes, diversity and resistance gene analogues in Musa species / Cytogenet Genome Res 121:59~66
Bai J / 2002 / Diversity in nucleotide binding site-leucine-rich repeat genes in cereals / Genome Res 12:1871~1884
Arya P / 2014 / Genome-wide identification and expression analysis of NBS-encoding genes in Malus x domestica and expansion of NBS genes family in Rosaceae / PLoS ONE 9:e107987
Aswati Nair R / 2007 / Isolation, characterization and expression studies of resistance gene candidates (RGCs) from Zingiber spp / Theor Appl Genet 116:123~134
Azhar M / 2008 / Genomes, diversity and resistance gene analogues in Musa species / Cytogenet Genome Res 121:59~66
Bai J / 2002 / Diversity in nucleotide binding site-leucine-rich repeat genes in cereals / Genome Res 12:1871~1884
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