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자료유형
학술저널
저자정보
Hong Zhao (Peking Union Medical College) Zhi-Zhou Shi (Peking Union Medical College) Rui Jiang (First People’s Hospital of Yunnan Province) Dong-Bing Zhao (Peking Union Medical College) Hai-Tao Zhou (Peking Union Medical College) Jian-Wei Liang (Peking Union Medical College) Xin-Yu Bi (Peking Union Medical College) Jian-Jun Zhao (Peking Union Medical College) Zhi-Yu Li (Peking Union Medical College) Jian-Guo Zhou (Peking Union Medical College) Zhen Huang (Peking Union Medical College) Ye-Fan Zhang (Peking Union Medical College) Jian Wang (Peking Union Medical College) Xin Xu (Peking Union Medical College) Yan Cai (Peking Union Medical College) Ming-Rong Wang (Peking Union Medical College) Yu Zhang (Peking Union Medical College)
저널정보
한국유전학회 Genes & Genomics Genes & Genomics Vol.38 No.11
발행연도
2016.1
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1,085 - 1,094 (10page)

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Genomic aberrations of rectal carcinoma, especially DNA copy number changes associated with metastasis were largely unclear. We aim to identify the metastasis associated biomarkers in stage II rectal cancer. Formalin-fixed, paraffin-embedded primary tumor tissues of stage II rectal carcinoma were analyzed by array-based comparative genomic hybridization, and genomic aberrations were identified by Genomic Workbench and SAM software. Copy number changes and mRNA expressions were validated by Real-time PCR in an independent rectal cancer samples. The results showed that the most frequent gains in stage II rectal cancer were at 1q21.2-q23.1, 3p21.31, 11q12.2-q23.3, 12q24.11-q24.31, 12q13.11-q14.1 and losses in 18q11.2-q23, 17q21.33-q22, 13q31.1-q31.3, 21q21.1-q21.3, 8p23.3-p23.1 and 4q22.1-q23. Twenty-two amplifications and five homozygous deletions were also identified. We further found that S100A1 (1q21.3-q23.1), MCM7 (7q22.1) and JUND (19p13.11) were amplified and overexpressed in stage II rectal cancer. Interestingly, the genomic aberrations affected 14 signaling pathways including VEGF signaling pathway and fatty acid metabolism. Most importantly, loss of 13q31.1-q34 and gain of 1q44 were associated with distant metastasis. Our results indicated that these metastasis associated genomic changes may be useful to reveal the pathogenesis of rectal cancer metastasis and identify candidate biomarkers.

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