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- 한국정보처리학회 JIPS(Journal of Information Processing Systems) JIPS(Journal of Information Processing Systems) 제12권 제1호
- 발행연도
- 2016.1
- 수록면
- 1 - 34 (34page)
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Gene identification is at the center of genomic studies. Although the first phase of the Encyclopedia of DNA Elements (ENCODE) project has been claimed to be complete, the annotation of the functional elements is far from being so. Computational methods in gene identification continue to play important roles in this area and other relevant issues. So far, a lot of work has been performed on this area, and a plethora of computational methods and avenues have been developed. Many review papers have summarized these methods and other related work. However, most of them focus on the methodologies from a particular aspect or perspective. Different from these existing bodies of research, this paper aims to comprehensively summarize the mainstream computational methods in gene identification and tries to provide a short but concise technical reference for future studies. Moreover, this review sheds light on the emerging trends and cutting-edge techniques that are believed to be capable of leading the research on this field in the future.
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참고문헌 (200)
참고문헌 신청
W. Klimke / 2011 / Solving the problem:genome annotation standards before the data deluge / Standards in Genomic Sciences 5(1):168~193
ENCODE Project Consortium / 2012 / An integrated encyclopedia of DNA elements in the human genome / Nature 489(7414):57~74
S. Djebali / 2012 / Landscape of transcription in human cells / Nature 489(7414):101~108
J. Harrow / 2009 / Identifying protein-coding genes in genomic sequences / Genome Biology 10(1):201
M. Hiller / 2012 / Hundreds of conserved noncoding genomic regions are independently lost in mammals / Nucleic Acids Research 40(22):11463~11476
ENCODE Project Consortium / 2012 / An integrated encyclopedia of DNA elements in the human genome / Nature 489(7414):57~74
S. Djebali / 2012 / Landscape of transcription in human cells / Nature 489(7414):101~108
J. Harrow / 2009 / Identifying protein-coding genes in genomic sequences / Genome Biology 10(1):201
M. Hiller / 2012 / Hundreds of conserved noncoding genomic regions are independently lost in mammals / Nucleic Acids Research 40(22):11463~11476
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