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논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 발행연도
- 2021.12
- 수록면
- 287 - 297 (11page)
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초록· 키워드
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Xanthomonas campestris pv. incanae (Xci) is the causal agent of bacterial blight disease in ornamental crucifers. Wecompared the whole genomes of closely related Xanthomonas campestris pv. campestris, incanae, raphani and four other species ofXanthomonas following comparative genomics approach. We found 82 singletons out of 4024 Xci genes upon comparison. Out of 82singletons, top 10 were selected for designing Xci specific marker. Five primers; XCI_1F/R, XCI_2F/R, XCI_3F/R, XCI_5F/R andXCI_6F/R produced amplicons of 495 bp, 503 bp, 612 bp, 665 bp and 468 bp, respectively expected to detect Xanthomonas campestrispv. incanae (Xci). In conclusion, five effective markers were developed for the detection of Xci pathogen by whole genome alignment,which could be served as effective tools in seed quarantine.
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참고문헌 (44)
참고문헌 신청
Abby S / 2007 / Comparative genomics and the evolution of prokaryotes / Trends in Microbiology 15:135~141
Abe I / 2005 / A plant type III polyketide synthase that produces pentaketide chromone / J. Am. Chem. Soc 127:1362~1363
Afrin KS / 2018 / Development of race-specific molecular marker for Xanthomonas campestris pv. campestris race 3, the causal agent of black rot of crucifers / Can. J. Plant Sci. 98:1119~1125
Aliyu H / 2016 / Phylogenomic re-assessment of the thermophilic genus Geobacillus / Syst. Appl, Microbiol 39:527~533
Berg T / 2005 / PCR based detection of Xanthomonas campestris pathovars in Brassica seed / Plant Pathol 54:416~427
Abe I / 2005 / A plant type III polyketide synthase that produces pentaketide chromone / J. Am. Chem. Soc 127:1362~1363
Afrin KS / 2018 / Development of race-specific molecular marker for Xanthomonas campestris pv. campestris race 3, the causal agent of black rot of crucifers / Can. J. Plant Sci. 98:1119~1125
Aliyu H / 2016 / Phylogenomic re-assessment of the thermophilic genus Geobacillus / Syst. Appl, Microbiol 39:527~533
Berg T / 2005 / PCR based detection of Xanthomonas campestris pathovars in Brassica seed / Plant Pathol 54:416~427
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