지원사업
학술연구/단체지원/교육 등 연구자 활동을 지속하도록 DBpia가 지원하고 있어요.
커뮤니티
연구자들이 자신의 연구와 전문성을 널리 알리고, 새로운 협력의 기회를 만들 수 있는 네트워킹 공간이에요.
논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 발행연도
- 2020.1
- 수록면
- 1,239 - 1,249 (11page)
이용수
초록· 키워드
오류제보하기
Background Salinity stress, as the key limiting factor for agricultural productivity, can activate a series of molecular responses and alter gene expression in plants. Endogenous regulatory small RNAs, such as microRNAs (miRNAs) and phased siRNAs (phasiRNAs), play crucial roles during stress adaptation and prevent the injury from environmental circumstances. Objective To identify long-term salt stress responsive miRNAs and phasiRNAs as well as their associated genes and pathways in soybean roots. Methods Small RNA and degradome sequencing strategies were applied to genome widely investigate miRNAs and phasiRNAs in soybean roots under control and long-term salt stress conditions. Results In this study, stringent bioinformatic analysis led to the identifcation of 253 conserved and 38 novel miRNA candidates. Results of expression profling, target and endogenous target mimics predictions provided valuable clues to their functional roles. Furthermore, 156 genes were identifed to be capable of generating 21 nt and 24 nt phasiRNAs, in which 37 candidates were confrmed by degradome data for miRNA-directed cleavage. Approximately 90% of these phasiRNA loci were protein coding genes. And GO enrichment analysis pointed to “signal transduction” and “ADP binding” entries and refected the functional roles of identifed phasiRNA genes. Conclusion Taken together, our fndings extended the knowledge of salt responsive miRNAs and phasiRNAs in soybean roots, and provided valuable information for a better understanding of the regulatory events caused by small RNAs underlying plant adaptations to long-term salt stress.
목차
등록된 정보가 없습니다.
참고문헌 (45)
참고문헌 신청
Addo-Quaye C / 2009 / CleaveLand : A pipeline for using degradome data to find cleaved small RNA targets / Bioinformatics 25:130~131
Arikit S / 2014 / An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes / Plant Cell Online 26:4584~4601
Aung K / 2006 / pho2, a phosphate overaccumulator, is caused by a nonsense mutation in a microRNA399 target gene / Plant Physiol 141:1000~1011
Borges F / 2015 / The expanding world of small RNAs in plants / Nat Rev Mol Cell Biol 16:727~741
Cech TR / 2014 / The noncoding RNA revolution-Trashing old rules to forge new ones / Cell 157:77~94
Arikit S / 2014 / An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes / Plant Cell Online 26:4584~4601
Aung K / 2006 / pho2, a phosphate overaccumulator, is caused by a nonsense mutation in a microRNA399 target gene / Plant Physiol 141:1000~1011
Borges F / 2015 / The expanding world of small RNAs in plants / Nat Rev Mol Cell Biol 16:727~741
Cech TR / 2014 / The noncoding RNA revolution-Trashing old rules to forge new ones / Cell 157:77~94
함께 읽어보면 좋을 논문
논문 유사도에 따라 DBpia 가 추천하는 논문입니다. 함께 보면 좋을 연관 논문을 확인해보세요!
-
EMPAS: Electron Microscopy Screening for Endogenous Protein Architectures
Molecules and Cells
2020 .01
-
Simultaneous profiling analysis of endogenous normal and modified nucleosides by liquid chromatography-tandem mass spectrometry
한국분석과학회 학술대회
2019 .05
-
Detection of Synthetic Forms of Endogenous Anabolic Androgenic Steroids by GC-C-IRMS
한국분석과학회 학술대회
2015 .05
-
Off-line clean-up and on-line preconcentration novel approaches prior to capillary electrophoresis (CE)-based techniques during the analysis of drug and endogenous substances
한국분석과학회 학술대회
2019 .05
-
Metabolic profiling of endogenous hormone in pattern baldness patients by liquid chromatography-mass spectrometry with chemical derivatization
한국분석과학회 학술대회
2017 .05
-
Strategies for confirming the qualitative and quantitative functionality of endogenous agricultural metabolites by advanced analytical methods for functional metabolites using UHPLC-QToF
한국분석과학회 학술대회
2022 .11
-
Endogenous Hydrogen Peroxide Increases Biofilm Formation by Inducing Exopolysaccharide Production in Acinetobacter oleivorans DR1
한국미생물학회 학술대회논문집
2016 .04
-
Analysis of Glycerol with Isolation of Endogenous Interferences Using “Dilute and Shoot” Strategy and High-Resolution Mass Spectrometry in Human Urine for Antidoping Testing
Mass Spectrometry Letters
2016 .12
-
Analysis of the 3β-hydroxyandrost-5-en-17-one and its endogenous metabolites by LC/TOF-MS and GC/TOF-MS
한국분석과학회 학술대회
2015 .11
-
내생적 성장모형을 이용한 탄소세와 에너지세의 파급효과
한국기후변화학회지
2023 .04
-
생존 자료와 경시적 자료의 결합모형을 이용한 과학화 전투훈련 분석
Journal of The Korean Data Analysis Society
2016 .12
-
Circular RNAs in and out of Cells: Therapeutic Usages of Circular RNAs
Molecules and Cells
2023 .01
-
In silico identification and computational characterization of endogenous small interfering RNAs from diverse grapevine tissues and stages
Genes & Genomics
2018 .01
-
Metabolomic Insights into Human Milk vs. Formula Milk : Qualitative Analysis using UPLC-MS/MS
한국분석과학회 학술대회
2023 .11
-
Method for Screening and Confirming Meldonium in Human Urine by High-Resolution Mass Spectrometry and Identification of Endogenous Interferences for Anti-Doping Testing
Mass Spectrometry Letters
2017 .06
-
초분광 영상의 표적신호 분리에 의한Matched Filter의 표적물질 탐지 성능 향상 연구
대한원격탐사학회지
2015 .01
-
Development of LC-MS/MS method for determination of FAHFA in biological samples
한국분석과학회 학술대회
2024 .11
-
인간 내성 리트로 바이러스(HERV)와 인간 면역 결핍 바이러스(HIV)의 상관관계
생명과학회지
2015 .04
-
Targeted Delivery of the Mitochondrial Target Domain of Noxa to Tumor Tissue via Synthetic Secretion System in E. coli
한국미생물학회 학술대회논문집
2020 .10
-
Human Endogenous Retroviruses as Gene Expression Regulators: Insights from Animal Models into Human Diseases
Molecules and Cells
2021 .12
이 논문의 저자 정보
최근 본 자료
댓글(0)
0