지원사업
학술연구/단체지원/교육 등 연구자 활동을 지속하도록 DBpia가 지원하고 있어요.
커뮤니티
연구자들이 자신의 연구와 전문성을 널리 알리고, 새로운 협력의 기회를 만들 수 있는 네트워킹 공간이에요.
논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 저널정보
- 한국미생물생명공학회 Journal of Microbiology and Biotechnology Journal of Microbiology and Biotechnology 제24권 제7호
- 발행연도
- 2014.1
- 수록면
- 979 - 986 (8page)
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초록· 키워드
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Plant pathogenic RNA viruses are present in a variety of plant-based foods. When ingested by humans, these viruses can survive the passage through the digestive tract, and are frequently detected in human feces. Kimchi is a traditional fermented Korean food made from cabbage or vegetables, with a variety of other plant-based ingredients, including ground red pepper and garlic paste. We analyzed microbial metatranscriptome data from kimchi at five fermentation stages to identify plant RNA virus-derived sequences. We successfully identified a substantial amount of plant RNA virus sequences, especially during the early stages of fermentation: 23.47% and 16.45% of total clean reads on days 7 and 13, respectively. The most abundant plant RNA virus sequences were from pepper mild mottle virus, a major pathogen of red peppers; this constituted 95% of the total RNA virus sequences identified throughout the fermentation period. We observed distinct sequencing read-depth distributions for plant RNA virus genomes, possibly implying intrinsic and/or technical biases during the metatranscriptome generation procedure. We also identified RNA virus sequences in publicly available microbial metatranscriptome data sets. We propose that metatranscriptome data may serve as a valuable resource for RNA virus detection, and a systematic screening of the ingredients may help prevent the use of virus-infected low-quality materials for food production.
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참고문헌 (31)
참고문헌 신청
Callaway A / 2001 / The multifunctional capsid proteins of plant RNA viruses / Annu. Rev. Phytopathol 39:419~460
Casado-Vela J / 2006 / Proteomic analysis of tobacco mosaic virus-infected tomato (Lycopersicon esculentum M.) fruits and detection of viral coat protein / Proteomics 6(1):196~206
Gug Seoun Choi / 2005 / Occurrence and Distribution of Viruses Infecting Pepper in Korea / The Plant Pathology Journal 21(3):258~261
Colson P / 2010 / Pepper mild mottle virus, a plant virus associated with specific immune responses, fever, abdominal pains, and pruritus in humans / PLoS ONE 5:10041
Dalsgaard K / 1997 / Plant-derived vaccine protects target animals against a viral disease / Nat. Biotechnol 15:248~252
Casado-Vela J / 2006 / Proteomic analysis of tobacco mosaic virus-infected tomato (Lycopersicon esculentum M.) fruits and detection of viral coat protein / Proteomics 6(1):196~206
Gug Seoun Choi / 2005 / Occurrence and Distribution of Viruses Infecting Pepper in Korea / The Plant Pathology Journal 21(3):258~261
Colson P / 2010 / Pepper mild mottle virus, a plant virus associated with specific immune responses, fever, abdominal pains, and pruritus in humans / PLoS ONE 5:10041
Dalsgaard K / 1997 / Plant-derived vaccine protects target animals against a viral disease / Nat. Biotechnol 15:248~252
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