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학술연구/단체지원/교육 등 연구자 활동을 지속하도록 DBpia가 지원하고 있어요.
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연구자들이 자신의 연구와 전문성을 널리 알리고, 새로운 협력의 기회를 만들 수 있는 네트워킹 공간이에요.
논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 발행연도
- 2010.1
- 수록면
- 153 - 165 (13page)
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Brassica rapa is considered an ideal candidate to act as a reference species for Brassica genomic studies. Among the three basic Brassica species, B. rapa (AA genome) has the smallest genome (529 Mbp), compared to B. nigra (BB genome, 632 Mbp) and B. oleracea (CC genome, 696 Mbp). There is also a large collection of available cultivars of B. rapa, as well as a broad array of B.rapa genomic resources available. Under international consensus, various genomic studies on B. rapa have been conducted, including the construction of a physical map based on 22.5X genome coverage, end sequencing of 146,000 BACs, sequencing of >150,000 expressed sequence tags, and successful phase 2 shotgun sequencing of 589 euchromatic region-tiling BACs based on comparative positioning with the Arabidopsis genome. These sequenced BACs mapped onto the B. rapa genome provide beginning points for genome sequencing of each chromosome. Applying this strategy, all of the 10 chromosomes of B. rapa have been assigned to the sequencing centers in seven countries, Korea, UK, China, India, Canada, Australia, and Japan. The two longest chromosomes, A3 and A9, have been sequenced except for several gaps, by NAAS in Korea. Meanwhile a China group, including IVF and BGI,performed whole genome sequencing with Illumina system. These Sanger and NGS sequence data will be integrated to assemble a draft sequence of B. rapa. The imminent B. rapa genome sequence offers novel insights into the organization and evolution of the Brassica genome. In parallel, the transfer of knowledge from B. rapa to other Brassica crops would be expected.
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등록된 정보가 없습니다.
참고문헌 (27)
참고문헌 신청
Ananiev EV / 1998 / Chromosomespecific molecular organization of maize (Zea mays L.) centromeric regions / Proc Natl Acad Sci USA : 13073 ~ 13078
Ayele M / 2005 / Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis / Genome Res 15 : 487 ~ 495
Beilstein MA / 2006 / Brassicaceae phylogeny and trichome evolution / Am J Bot 93 : 607 ~ 619
Beom-Seok Park / 2005 / Characterization of rDNAs and Tandem Repeats in the Heterochromatin of Brassica rapa / 분자와 세포 19 (3) : 436 ~ 444
Bowers JE / 2003 / Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events / Nature 422 : 433 ~ 438
Ayele M / 2005 / Whole genome shotgun sequencing of Brassica oleracea and its application to gene discovery and annotation in Arabidopsis / Genome Res 15 : 487 ~ 495
Beilstein MA / 2006 / Brassicaceae phylogeny and trichome evolution / Am J Bot 93 : 607 ~ 619
Beom-Seok Park / 2005 / Characterization of rDNAs and Tandem Repeats in the Heterochromatin of Brassica rapa / 분자와 세포 19 (3) : 436 ~ 444
Bowers JE / 2003 / Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events / Nature 422 : 433 ~ 438
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